University of Florida Forest Ecophysiology Lab

Refereed Publications

43. Vogel, J.G., L. Suau, T.A. Martin, and E.J. Jokela. 2011. Long term effects of weed control and fertilization on the carbon and nitrogen pools of a slash and loblolly pine forest in north central Florida. Canadian Journal of Forest Research 41:552-567.

42. Gonzalez-Benecke, C.A., T.A. Martin, and W.P. Cropper, Jr. 2011.Whole-tree water relations of co-occurring mature Pinus palustris and P. elliottii. Canadian Journal of Forest Research 41:509-523.

41. Xiao, J., Q. Zhuang, B.E. Law, D.D. Baldocchi, J. Chen, A.D. Richardson, J.M. Melillo, K.J. Davis, D.Y. Hollinger, S. Wharton, R. Oren, A. Noormets, M.L. Fischer, S.B. Verma, D.R. Cook, G. Sun, S.G. McNulty, S.C. Wofsy, P.V. Bolstad, S.P. Burns, P.S. Curtis, B.G. Drake, M. Falk, D.R. Foster, L. Gu, J.L. Hadley, G.G. Katul, M. Litvak, S. Ma, T.A. Martin, R. Matamala, T.P. Meyers, R.K. Monson, J.W. Munger, W.C. Oechel, K.T. Paw U, H.P. Schmid, R.L. Scott, G. Starr, A. Suyker, and M.S. Torn. 2011. Assessing net ecosystem carbon exchange of U.S. terrestrial ecosystems by integrating eddy covariance flux measurements and satellite observations. Agricultural and Forest Meteorology 151:60-69.

40. Gonzalez-Benecke, C.A., T.A. Martin, A. Clark, III, and G.F. Peter. 2010. Water availability and genetic effects on wood properties of loblolly pine (Pinus taeda L.). Canadian Journal of Forest Research 40:2265-2277.

39. Yi, C., D. Ricciuto, R. Li, J. Wolbeck, X. Xu, M. Nilsson, L. Aires, J. D. Albertson, C. Ammann, M. A. Arain, A. C. de Araujo, M. Aubinet, M. Aurela, Z. Barcza, A. Barr, P. Berbigier, J. Beringer, C. Bernhofer, A. T. Black, P. V. Bolstad, F. C. Bosveld, M. S. J. Broadmeadow, N. Buchmann, S. P. Burns, P. Cellier, J.M. Chen, J.Q. Chen, P. Ciais, R. Clement, B. D. Cook, P. S. Curtis, D. B. Dail, E. Dellwik, N. Delpierre, A. R. Desai, S. Dore, D. Dragoni, B. G. Drake, E. Dufrêne, A. Dunn, J. Elbers, W. Eugster, M. Falk, C. Feigenwinter, L. B. Flanagan, T. Foken, J. Frank, J. Fuhrer, D. Gianelle, A. Goldstein, M. Goulden, A. Granier, T. Grünwald, L. Gu, H. Guo, A. Hammerle, S. Han, N. P Hanan, L. Haszpra, B. Heinesch, C. Helfter, D. Hendriks, L. B. Hutley, A. Ibrom, C. Jacobs, T. Johansson, M. Jongen, G. Katul, G. Kiely, K. Klumpp, A. Knohl, T. Kolb, W. L. Kutsch, P. Lafleur, T. Laurila, R. Leuning, A. Lindroth, H. Liu, B. Loubet, G. Manca, M. Marek, H. A. Margolis, T. A. Martin, W. J Massman, R. Matamala, G. Matteucci, H. McCaughey, L. Merbold, T. Meyers, M. Migliavacca, F. Miglietta, L. Misson, M. Mölder, J. Moncrieff, R. K. Monson, L. Montagnani, M. Montes-Helu, E. Moors, Ch. Moureaux, M. M Mukelabai, J. W. Munger, M. Myklebust, Z. Nagy, A. Noormets, W. Oechel, R. Oren, S. G. Pallardy, K. T. Paw U, J. S. Pereira, K. Pilegaard, K. Pintér, C. Pio, G. Pita, T. L. Powell, S. Rambal, J. T. Randerson, C. von Randow, C. Rebmann, J. Rinne, F. Rossi, N. Roulet, R. J. Ryel, J. Sagerfors, N. Saigusa, M. J. Sanz, G.S. Mugnozza, H. P. Schmid, G. Seufert, M. Siqueira, J. F. Soussana, G. Starr, M. A. Sutton, J. Tenhunen, Z. Tuba, J. P. Tuovinen, R.Valentini, C. S. Vogel, J. Wang, S. Wang, W. Wang, L. R. Welp, X. Wen, S. Wharton, M. Wilkinson, C. A. Williams, G. Wohlfahrt, S. Yamamoto, G. Yu, R. Zampedri, B. Zhao, X. Zhao. 2010. Climate control of terrestrial carbon exchange across biomes and continents. Environmental Research Letters 5 doi: 10.1088/1748-9326/5/3/034007.

38. Amiro, B.D., A.G. Barr, J.G. Barr, T.A. Black, R. Bracho, M. Brown, J. Chen, K.L. Clark, K.J. Davis, A.R. Desai, S. Dore, V. Engel, J.D. Fuentes, A.H. Goldstein, M.L. Goulden, T.E. Kolb, M.B. Lavigne, B.E. Law, H.A. Margolis, T.A. Martin, J.H. McCaughey, L. Misson, M. Montes-Helu, A. Noormets, J.T. Randerson, G. Starr, and J. Xiao. 2010. Ecosystem carbon dioxide fluxes after disturbance in forests of North America. Journal of Geophysical Research-Biogeosciences 115:G00K02 doi:10.1029/2010JG001390.

37. Jokela, E.J., T.A. Martin, and J.G. Vogel. 2010. Twenty-five years of intensive forest management with southern pines: Important lessons learned. Journal of Forestry 108:338-347.

36. Gonzalez-Benecke, C.A., T.A. Martin, W.P. Cropper, Jr., and R. Bracho. 2010. Forest management effects on in situ and ex situ slash pine forest carbon balance. Forest Ecology and Management 260:795-805.

35. Lavoie, M., G. Starr, M.C. Mack, T.A. Martin and H.L. Gholz. 2010. Effects of a prescribed fire on understory vegetation, carbon pools and soil nutrients in a longleaf pine – slash pine forest in Florida. Natural Areas Journal 30: 82-94.

34. Gonzalez-Benecke, C.A., T.A. Martin, and G.F. Peter. 2010. Hydraulic architecture and tracheid allometry in mature Pinus palustris and P. elliottii trees. Tree Physiology 30: 361-375.

33. Gonzalez-Benecke, C.A., and T.A. Martin. 2010. Water availability and genetic effects on water relations of loblolly pine (Pinus taeda L.) stands. Tree Physiology 30: 376-392.

32. Xiao, J., Q. Zhuang, B.E. Law, J. Chen, D.D. Baldocchi, D.R. Cook, R. Oren, A.D. Richardson, S. Wharton, S. Ma, T.A. Martin, S.B. Verma, A.E. Suyker, R.L. Scott, R.K. Monson, M. Litvak, D.Y. Hollinger, G. Sun, K.J. Davis, P.V. Bolstad, S.P. Burns, P.S. Curtis, B.G. Drake, M. Falk, M.L. Fischer, D.R. Foster, L. Gu, J.L. Hadley, G.G. Katul, R. Matamala, S.G. McNulty, T.P. Meyers, J.W. Munger, A. Noormets, W.C. Oechel, K.T. Paw U, H.P. Schmid, G. Starr, M.S. Torn, and S.C. Wofsy. 2010. A continuous measure of gross primary prodcutivity for the conterminous U.S. derived from MODIS and AmeriFlux data. Remote Sensing of Environment 114: 576-591.

31. Nedlo, J.E., T.A. Martin, J.M. Vose, and R.O. Teskey. 2009. Growing season temperatures limit growth of loblolly pine (Pinus taeda L.) seedlings across a wide geographic transect. Trees: Structure and Function 23: 751-759.

30. Novaes, E., L. Osorio, D.R. Drost, B.L. Miles, C.R.D.B. Novaes, C. Benedict, C. Dervinis, Q. Yu, R. Sykes, M. Davis, T.A. Martin, G.F. Peter, and M. Kirst. 2009. Quantitative genetic analysis of biomass and wood chemistry of Populus under different nitrogen levels. New Phytologist 182: 878-890.

29. Chmura, D.J., M.G. Tjoelker, and T.A. Martin. 2009. Environmental and genetic effects on crown shape in young loblolly pine plantations. Canadian Journal of Forest Research 39: 691-698.

28. Staudhammer, C.L., E.J. Jokela, and T.A. Martin. 2009. Competition dynamics in pure- versus mixed-family stands of loblolly and slash pine in the southeastern United States. Canadian Journal of Forest Research 39:396-409.

27. Ollinger, S.V., A.D. Richardson, M.E. Martin, D.Y. Hollinger, S. Frolking, P.B. Reich, L.C. Plourde, G.G. Katul, J.W. Munger, R. Oren, M-L. Smith, K.T. Paw U, P.V. Bolstad, B.D. Cook, M.C. Day, T.A. Martin, R.K. Monson, and H.P. Schmid. 2008. Canopy nitrogen, carbon assimilation and albedo in temperate and boreal forests: functional relations and potential climate feedbacks. Proceedings of the National Academy of Sciences U.S.A. 105:19335-19340.

26. Powell, T.L., H.L. Gholz, K.L. Clark, G. Starr, W.P. Cropper, Jr., and T.A. Martin. 2008. Carbon exchange of a mature naturally-regenerated pine forest in north Florida. Global Change Biology 14:2523-2538.

25. Xiao, J., Q. Zhuang, D.D. Baldocchi, B.E. Law, A.D. Richardson, J. Chen, R. Oren, G. Starr, A. Noormets, S. Ma, S.B. Verma, S. Wharton, S.C. Wofsy, P.V. Bolstad, S.P. Burns, D.R. Cook, P.S. Curtis, B.G. Drake, M. Falk, M.L. Fischer, D.R. Foster, L. Gu, J.L. Hadley, D.Y. Hollinger, G.G. Katul, M. Litvak, T.A. Martin, R. Matamala, S.G. McNulty, T.P. Meyers, R.K. Monson, J.W. Munger, W.C. Oechel, K.T. Paw U, H.P. Schmid, R.L. Scott, G. Sun, A.E. Suker, and M.S. Torn. 2008. Estimation of net ecosystem carbon exchange for the conterminous United States by combining MODIS and AmeriFlux data. Agricultural and Forest Meteorology 148:1827-1847.

24. Baltunis, B.S., T.A. Martin, D.A. Huber, and J.M. Davis. 2008. Inheritance of foliar stable carbon isotope discrimination and third-year height in Pinus taeda clones on contrasting sites in Florida and Georgia. Tree Genetics and Genomes 4:797-807.

23. Medina Perez, A.M., T.L. White, D.A. Huber, and T.A. Martin. 2007. Graft survival and promotion of female and male strobili by topgrafting in a third-cycle slash pine (Pinus elliottii var. elliottii) breeding program. Canadian Journal of Forest Research 37:1244-1252.

22. Roth, B.E., E.J. Jokela, T.A. Martin, D.A. Huber, and T.L. White. 2007. Genotype x environment interactions in selected loblolly and slash pine plantations in the southeastern United States. Forest Ecology and Management 238:175-188.

21. Emhart, V.I., T.A. Martin, T.L. White, and D.A. Huber. 2007. Clonal variation in crown structure, absorbed photosynthetically active radiation and growth of loblolly and slash pines. Tree Physiology 27:421-430.

20. Binford, M.W., H L. Gholz, G. Starr, and T.A. Martin. 2006. Regional carbon dynamics in the southeastern U.S. coastal plain: Balancing land cover type, timber harvesting, fire, and environmental variation. Journal of Geophysical Research - Atmospheres 111: D24S92, doi:10.1029/2005JD006820.

19. Loescher, H.W., G. Starr, T.A. Martin, M. Binford, and H.L. Gholz. 2006. The effect of local atmospheric circulations on daytime carbon dioxide flux measurements over a Pinus elliottii canopy. Journal of Applied Meteorology and Climatology 45:1127-1140.

18. Karipot, A., M.Y. Leclerc, G. Zhang, T.A. Martin, G. Starr, D.Y. Hollinger, J.H. McCaughey, and G.R. Hendrey. 2006. Nocturnal CO2 exchange over a tall forest canopy associated with intermittent low-level jet activity.   Theoretical and Applied Climatology 85:243-248.

17. Emhart, V.I., T.A. Martin, T.L. White, and D.A. Huber. 2006. Genetic variation in basal area increment phenology and its correlation with growth rate in loblolly and slash pine families and clones. Canadian Journal of Forest Research 36:961-971.

16. Powell, T.L., G. Starr, K.L. Clark, T.A. Martin, and H.L. Gholz. 2005. Ecosystem and understory water and energy exchange for a mature, naturally regenerated pine flatwoods forest in north Florida. Canadian Journal of Forest Research 35(7):1568-1580.

15. Cooke, J.E.K., T.A. Martin, and J.M. Davis. 2005. Short term physiological and developmental responses to nitrogen availability in hybrid poplar. New Phytologist 167:41-52.

14. Martin, T.A., P.M. Dougherty, M.A. Topa, and S.E. McKeand. 2005. Strategies and case studies for incorporating ecophysiology into southern pine tree improvement programs. Southern Journal of Applied Forestry 29:70-79.

13. Angeles, G., B.J. Bond, J.S. Boyer, T.J. Brodribb, J.R. Brooks, M.J. Burns, J.M. Cavender-Bares, M.J. Clearwater, H. Cochard, J.P. Comstock, S.D. Davis, J.-C. Domec, L.A. Donovan, F.W. Ewers, B.L. Gartner, U.G. Hacke, T.M. Hinckley, N.M. Holbrook, H.G. Jones, K.L. Kavanagh, B.E. Law, J. Lopez-Portillo, C. Lovisolo, T.A. Martin, J. Martinez-Vilalta, S. Mayr, F.C. Meinzer, P.J. Melcher, M. Mencuccini, S.S. Mulkey, A. Nardini, H. Neufeld, J.B. Passioura, W.T. Pockman, R.B. Pratt, S. Rambal, H. Richter, L. Sack, S. Salleo, A. Schubert, P.J. Schulte, J.P. Sparks, J.S. Sperry, R.O. Teskey, and M.T. Tyree. 2004. The cohesion-tension theory. New Phytologist 163:451-452.

12. Martin, T.A., and E.J. Jokela. 2004. Developmental patterns and nutrition impact radiation use efficiency components in southern pine stands. Ecological Applications 14:1839-1854.

11. Jokela, E.J., P.M. Dougherty, and T.A. Martin.  2004. Production dynamics of intensively managed loblolly pine stands in the southern United States: A synthesis of seven long-term experiments. Forest Ecology and Management 192:117-130.

10. Martin, T.A., and E.J. Jokela. 2004. Stand development and production dynamics of loblolly pine growing on spodosols in North-Central Florida USA. Forest Ecology and Management 192:39-58.

9. McGarvey, R.C., T.A. Martin, and T.L. White. 2004. Integrating within-crown variation in net photosynthesis in loblolly and slash pine families. Tree Physiology 24:1209-1220.

8. Martin, T.A., K.J. Brown, J. Kucera, F.C. Meinzer, D.G. Sprugel, and T.M. Hinckley. 2001. Control of transpiration in a 220-year-old Abies amabilis forest. Forest Ecology and Management 152:211-224.

7. Martin, T.A., K.H. Johnsen, and T.L. White. 2001. Ideotype development in southern pines: Rationale and strategies for overcoming scale-related obstacles. Forest Science 47:21-28.

6. Jokela, E.J., and T.A. Martin. 2000. Effects of ontogeny and soil nutrient supply on production, allocation and leaf area efficiency in loblolly and slash pine stands. Canadian Journal of Forest Research 30:1511-1524.

5. Martin, T.A. 2000. Winter season tree sap flow and stand transpiration in an intensively-managed loblolly and slash pine plantation. Journal of Sustainable Forestry 10:155-163.

4. Hinckley, T. M., M. R. Keyes, T. A. Martin, and D. G. Sprugel. 1999. Lessons from montane forests of the Pacific Northwest. Phyton 39:73-84.

3. Martin, T.A., T.M. Hinckley, F.C. Meinzer and D.G. Sprugel. 1999. Boundary layer conductance, leaf temperature and transpiration of Abies amabilis branches. Tree Physiology 19:435-443.

2. Martin, T.A., K.J. Brown, J. Cermak, R. Ceulemans, J. Kucera, F.C. Meinzer, J.S. Rombold, D.G. Sprugel and T.M. Hinckley. 1997. Crown conductance and tree and stand transpiration in a second-growth Abies amabilis forest. Canadian Journal of Forest Research 27:797-808.

1. Martin, T.A., R.O. Teskey, and P.M. Dougherty. 1994. Movement of respiratory CO2 in stems of loblolly pine (Pinus taeda L.) seedlings. Tree Physiology 14:481-495.

Book Chapters

3. Bellow, J., P.K.R. Nair, and T.A. Martin. 2008. Tree-crop interactions in fruit-tree-based agroforestry systems in the Western Highlands of Guatemala: Component yields and system performance. In: Toward Agroforestry Design: An Ecological Approach, Advances in Agroforestry 4, S. Jose and A.M. Gordon, Eds. pp. 111-131.

2. Hinckley, T.M., D.G. Sprugel, J.R. Brooks, K.J. Brown, T.A. Martin, D.A. Roberts, G. Segura, W. Schaap and D. Wang. 1998. Scaling and integration in trees. In: Ecological Scale: Theory and Applications, D.L. Peterson and V.T. Parker, Eds. Columbia University Press, New York. pp. 309-337.

1. Sprugel, D.G., M.G. Ryan, J.R. Brooks, K.A. Vogt and T.A. Martin. 1995. Respiration from the organ level to the stand. In: Resource Physiology of Conifers, W.K. Smith and T.M. Hinckley, Eds. Academic Press, Inc., San Diego. pp. 255-299.

Non-Refereed Publications

2. Roth, B.E., T.A. Martin, E.J. Jokela, and T.L. White. 2002. Finding the keys to unlock the productivity of southern forests. Florida Forests 6:18-20.

1. Martin, T.A. 1997. Deep roots: Cooperative research in forest productivity at the University of Florida. Florida Forests, Fall 1997: 22-27.